Overview of Research

Due to the relatively poor long-term survival rates, we recognize the need for improving our understanding of the molecular pathogenesis of sarcomas and the identification of new therapeutic avenues. Our  translational research lab is at the forefront of studying the pediatric sarcomas, with an emphasis on further understanding the biological, molecular and genetic mechanisms of metastasis and therapeutic resistance for osteosarcoma (OS), Ewing sarcoma (ES), and rhabdomyosarcoma (RMS). There has been minimal progress in improving patient outcomes for these malignancies over the past 20-30 years. My laboratory has tremendous interest and experience in merging innovative murine models, including novel genetically engineered mouse models of OS and RMS, and patient-derived resources towards garnering molecular insights into sarcoma initiation, development/resistance and metastatic progression and translating these findings towards testing novel therapeutic interventions for these aggressive malignancies. For example, our team provided the vital pre-clinical studies essential for developing a clinical trial for Tegavivint, a novel TBL1/β-catenin inhibitor, in the treatment of relapsed pediatric solid tumors, including sarcomas, which opened in October 2021. Our overall goals are to use our extensive models towards gaining critical insights into both tumor intrinsic and extrinsic (e.g., immune and stromal cells) features that will lead to a better understanding of mechanisms of metastasis and therapeutic resistance. We aim to directly translate these insights into identification of pharmacological vulnerabilities that can lead to new treatment options for our patients afflicted with these deadly diseases.

 

Taku Yamamichi, Post-Doctoral Fellow

Education: MD, PhD (Medicine); Graduate School of Medicine, Osaka University 

Current Project: Mechanisms of metastasis in pedatric sarcomas

Fun Fact: Enjoys slow jogging 

Email: taku.yamamichi@emory.edu

 

Bikesh Kumar Nirala, Associate Research Scientist 

Education: PhD  (Biomedical Engineering), Indian Institute of Technology 

Current Project: Development and characterization of the osteosarcoma mouse model

Fun Fact: Not present in the lab and photography

Email: bikesh.kumar.nirala@emory.edu

 

Tajhal D. Patel, Staff Scientist

Education: PhD (Cell and Molecular Biology), Baylor College of Medicine 

Current Project: Utilizing bioinformatic approaches to study pediatric sarcomas 

Fun Fact: Mom to triplets

Email: dayaram@bcm.edu 

 

Juan Dou, Senior Research Specialist

Education: Masters (Philosophy in Pediatrics), Sun Yat-sen University of the third affiliated hospital, Guangzhou, China, 2006; MD (Medical Sciences), Wannan Medical College, Wuhu, Anhui, China, 1994

Current Project: Molecular Mechanisms underlying Rhabdomyosarcoma (RMS) and Osteosarcoma (OS) and Mechanism-based therapeutics for these children-associated solid tumors

Fun Fact: Enjoy reading, cooking, gardening and traveling

Email: jdou2@emory.edu

 

Tasnuva Nuhat Shafin, Research Specialist

Education: MS (Physiology and Neurobiology), University of Connecticut

Current Project: Use of combinatorial therapies to improve immune-mediated approaches for high-risk osteosarcoma   

Fun Fact: Enjoys cooking, traveling and spending time with friends and family

Email: tshafin@emory.edu

 

Sarah S. Kappa, Pedaitric Hematology/Oncology Fellow

Education: MD, Emory University School of Medicine; Residency and Chief Residency, Children's National Hospital, Washington DC; Fellowship, Texas Children's Hospital/Baylor College of Medicine, Houston, TX

Current Project: Investigating Oncogenic Signaling Inhibition in Combination with Immune Checkpoint Blockade for the Treatment of Osteosarcoma

Fun Fact: When I studied abroad during college I bungy jumped off of the Bloukrans Bridge in South Africa, which is one of the world's highest bungy jumps. While it was exhilarating, it is likely not something I will do again!

Email: sskappa@texaschildrens.org

Tsang, S.V.,  N. Rainusso, M. Liu, M. Nomura, T. D. Patel, K. Nakahata, H.R. Kim, S. Huang, K. Rajapakshe, C. Coarfa, T.-K. Man, P. H. Rao, and J. T. Yustein. “LncRNA PVT-1 promotes osteosarcoma cancer stem-like properties through interaction with TRIM28 and TSC2 ubiquitination”. Oncogene. 2022 Nov 8. doi: 10.1038/s41388-022-02538-w. Online ahead of print. PMID: 36348010

Tu, J., Z. Huo, Y. Yu, H. Luo, D. Zhu, A. Xu, R. Wang, R. Hu, J.A. Gingold, J. Su, M.F. Huang, K.L. Tsai, R. Zhou, H.M. Chen, W. He, S.H. Chen, T.R. Webb, H. Yang, P. Jia, J.T. Yustein, L.L. Wang, M.C. Hung, Z. Zhao, R. Zhao, C. D. Huff, J. Shen, and D.F. Lee. “Hereditary retinoblastoma iPSC mode reveals spliceosome as a therapeutic vulnerability of RB1-mutant cancers”. Proc Natl Acad Sci U S A. 2022 Apr 19;119(16):e2117857119. doi: 10.1073/pnas.2117857119. Epub 2022 Apr 11.PMID: 3541290

Guo, H. Huang, Z. Zhu, M. J. Chen, H. Shi, P. Sharma, J. P. Connelly, S. Liedmann, Y. Dhungana, Z. Li, D. Haydar, M. Yang, H. Beere, J. T. Yustein, C. DeRenzo, S. M. Pruett-Miller, G. Krenciute, C. W.M. Roberts, H. Chi, D. R. Green. “The SWI/SNF canonical BAF complex and c-Myc cooperate to promote early fate decisions in CD8+ T cells” Nature. 2022 Jul;607(7917):135-141. doi: 10.1038/s41586-022-04849-0. Epub 2022 Jun 22. PMID: 35732731

K. Nakahata, B. Simons, E. Pozzo, R. Shuck, L. Kurenbekova, T. Patel, and J. T. Yustein. “MyoD-Cre driven alterations in mutant Kras and p53 leads to a mouse model with histological and molecular characteristics of human rhabdomyosarcoma with pre-clinical applications” Dis Model Mech. 2022 Feb 1;15(2):dmm049004. doi: 10.1242/dmm.049004. Epub 2022 Feb 17.PMID: 35174853  Editor’s Choice; Highlighted in special Ras Issue due out in 02/2022.

Liikanen, I., C. Lauhan, S. Quon, K. Omulisik, A.T. Phan, L. Barcelo- Bartroli, J. Goulding, J. Chen, J. P. Scott-Browne , J.T Yustein, N. E. Scharping, D.A. Witherden, A.W. Goldrath. “Hypoxia-inducible factor activity promotes anti-tumor effector function and tissue-residency by CD8+ T cells”. J Clin Invest. 2021 Apr 1;131(7):e143729. doi: 10.1172/JCI143729. PMID: 33792560

Shawki L. Qasim, Laura Sierra, Ryan Shuck, Lyazat Kurenbekova, Tajhal D. Patel, Kimal Rajapakshe, Jade Wulff, Kengo Nakahata, Ha Ram Kim, Yosef Landesman, TJ Unger, Cristian Coarfa, and Jason T. Yustein. “p21-Activated Kinases as a viable therapeutic target for high-risk Ewing sarcoma”. Oncogene. 2021 Jan 7. doi: 10.1038/s41388-020-01600-9. PMID: 33414491 

Dasgupta, A., L. Sierra, S. Tseng, L. Kurenbekova, T. Patel, R. Shuck, N. Rainusso, C. Coarfa and J. T. Yustein. “Targeting PAK4 has therapeutic potential for relapsed and metastatic rhabdomyosarcoma”. Cancer Res. 2020 Nov 9:canres.0854.2020. doi: 10.1158/0008-5472.CAN-20-0854. Online ahead of print. PMID: 33168646

Motonari Nomura, Nino Rainusso, Yi-Chien Lee, Brian Dawson, Ruolan Han, Jeffrey L. Larson, Ryan Shuck, Lyazat Kurenbekova and J.T. Yustein. “Tegavivint and the β-catenin/ALDH Axis in Chemotherapy-Resistant and Metastatic Osteosarcoma”. J Natl Cancer Inst. 2019 Feb 21. pii: djz026. doi: 10.1093/jnci/djz026.

NIH/R01

Dissecting and Targeting Oncogenic Functions of PAK4 in High-Risk Rhabdomyosarcoma

Role: PI

 

NIH/R01

Intratumoral Imaging of Hypoxia Using 1H- and 19F-MRI with Redox-Responsive Eu-Based Contrast Agents

Role: PI

MPI: Allen/Pautler

 

The Charlie Landers Foundation 

Dissecting and Targeting PAK4-Mediated Signaling in Ewing Sarcoma Development and Metastasis 

Role: PI

 

NIH/R21

Development of Bone-Targeting Antibodies for Ewing Sarcoma Using Genetic Code Expansion

Role: PI

MPI: Xiao

 

NIH/R21

Dissecting and Targeting the Role of GALNT14 in High-Risk Osteosarcoma Development and Progression

Role: PI

MPI: Kohler

 

Innovations in Oncology Award 

Characterizing and Targeting Intrinsic and Immune Modulatory Functions of PAK4 in High-Risk Rhabdomyosarcoma

Role: PI

 

Making It Better (MIB) Research Award 

Combinatorial Therapies to Improve Immune-Mediated Approaches for Osteosarcoma

Role: PI

 

Osteosarcoma Institute

Use of Combinatorial Therapies to Improve Immune-Mediated Approaches for High-Risk Osteosarcoma                                                                                                                          

Role: PI

MPI: Gottschalk

 

Rally Foundation for Childhood Cancer Research

Dissecting and Targeting the WNT Pathway in Metastatic Osteosarcoma       

Role: PI